BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A12LP1|AL430164
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1166 1102 0.0
3x_Contig194 341 2e-93
>3x_Contig1166
Length = 5040
Score = 1102 bits (556), Expect = 0.0
Identities = 556/556 (100%)
Strand = Plus / Minus
Query: 398 tgaaagcacaaacgaccaagtcaccaccatatggggctcttggtgaaactgcaatcttgt 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5040 tgaaagcacaaacgaccaagtcaccaccatatggggctcttggtgaaactgcaatcttgt 4981
Query: 458 tacatctttccactacttcaatgactgagttaatatcagataagtctaattctggagaaa 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4980 tacatctttccactacttcaatgactgagttaatatcagataagtctaattctggagaaa 4921
Query: 518 caccttgagtgtacatgttcaatgcgacagtaaccaagtcaacgttaccagtacgttcac 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4920 caccttgagtgtacatgttcaatgcgacagtaaccaagtcaacgttaccagtacgttcac 4861
Query: 578 cattaccgaataaacaaccttcgacacggtcagcaccagccaaaatacctagttcagaag 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4860 cattaccgaataaacaaccttcgacacggtcagcaccagccaaaatacctagttcagaag 4801
Query: 638 cagcaacaccacagccacggtcgttgtgcgcatgtgtggagatacagaccttttcacgtt 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4800 cagcaacaccacagccacggtcgttgtgcgcatgtgtggagatacagaccttttcacgtt 4741
Query: 698 cagatatgtgagttgaaaagtattcaatttgatcagcgtaaatgtttggagtagcgactt 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4740 cagatatgtgagttgaaaagtattcaatttgatcagcgtaaatgtttggagtagcgactt 4681
Query: 758 cgacggtagcaggtaggttgaaaatgattgggttttcctcagttggttcccaagcagcct 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4680 cgacggtagcaggtaggttgaaaatgattgggttttcctcagttggttcccaagcagcct 4621
Query: 818 ttacggcttcacagatctcaacagcaaattctacaggtgtatcactgaaacattctggag 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4620 ttacggcttcacagatctcaacagcaaattctacaggtgtatcactgaaacattctggag 4561
Query: 878 agaactggtaagtccattgtgtagcactttgcgaaggatcatccttggtcaatttcctaa 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4560 agaactggtaagtccattgtgtagcactttgcgaaggatcatccttggtcaatttcctaa 4501
Query: 938 ctaacttggtggcttc 953
||||||||||||||||
Sbjct: 4500 ctaacttggtggcttc 4485
>3x_Contig194
Length = 985
Score = 341 bits (172), Expect = 2e-93
Identities = 179/180 (99%), Gaps = 1/180 (0%)
Strand = Plus / Minus
Query: 1 caacaaaactcttctgatcaccctgtcactttagaaacattgtattctaacaaagaaatg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 179 caacaaaactcttctgatcaccctgt-actttagaaacattgtattctaacaaagaaatg 121
Query: 61 ttggaggcgcttccatcgaggttgtataacgacttgaaggtgctgacaatttcgtttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ttggaggcgcttccatcgaggttgtataacgacttgaaggtgctgacaatttcgtttgcc 61
Query: 121 tttagttccttacctagagcatcagccttttcttgcacttgagtggaaaattcaatttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tttagttccttacctagagcatcagccttttcttgcacttgagtggaaaattcaatttgc 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6457
Number of Sequences: 1807
Number of extensions: 6457
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 2
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)